-- Build files have been written to: /home/patricaholden/williamson/testbuild/Pro3-Linux/packages/libiio/build, Just to point out - we already provide binaries for armhf (Raspbian Stretch & Raspbian Jessie), they are linked from the readme at: I've installed libxml2-dev in my Ubuntu 20.04 terminal (under WSL), as it's a requirement for pgModeler. Yes, i think it is looking for libxml-2.0.pc in /usr/lib/pkgconfig/ direcotry, but it is not there. but an incompatible library. // . [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C, attached base packages: By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. checking whether gcc accepts -g yes ** package XML successfully unpacked and MD5 sums checked No package 'libxml-2.0' found Consider adjusting the PKG_CONFIG_PATH environment variable if you installed software in a non-standard prefix. CMake Warning at bindings/python/CMakeLists.txt:4 (find_package): Checking Irreducibility to a Polynomial with Non-constant Degree over Integer. -- Looking for libusb-1.0 : Found configure: error: "libxml not found" How to check for #1 being either `d` or `h` with latex3? Can my creature spell be countered if I cast a split second spell after it? rev2023.4.21.43403. cd libiio What does the power set mean in the construction of Von Neumann universe? "Signpost" puzzle from Tatham's collection. like I said, libxml2 and libxml2-dev are already on the system. By clicking Sign up for GitHub, you agree to our terms of service and Easy way of installing it is using yum by issuing the following command on your CentOS/Fedora/RHEL Linux distributions. This time, it was XML. Using libxml2. Why can pkg-config not find gsettings-desktop-schemas? Here is the diff in case someone else has the same problem, what didn't work, but I also tried: building and installing AUR version libxml2-git as well as installing libxml2-2.9.9-2. Making statements based on opinion; back them up with references or personal experience. Would you ever say "eat pig" instead of "eat pork"? mismatched. Checking directory of LIBXML_INCDIR checking how to run the C preprocessor gcc -E Installing R package XML on MacOS 10.13.6 I note there is a pkg-config file listed for libxml2 by homebrew at: which is also available via a non-version-specific symlink as: so, if you have installed pkg-config with homebrew, like this: the solution may be just to add the path for that to your PKG_CONFIG_PATH with: Note: It is only after installing pkg-config (via brew) that homebrew will display pkg-config related "caveats" for many affected packages e.g. Located parser file /home/***/anaconda3/include/libxml2//parser.h headers, it was still possible to declare them manually. The best answers are voted up and rise to the top, Not the answer you're looking for? Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 pthread library not found; support for threads will be disabled. 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI. By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. How a top-ranked engineering school reimagined CS curriculum (Ep. If you run: brew ls libxml2. Why did DOS-based Windows require HIMEM.SYS to boot? of the following names: Add the installation prefix of "Python" to CMAKE_PREFIX_PATH or set To subscribe to this RSS feed, copy and paste this URL into your RSS reader. make thank you so much. The text was updated successfully, but these errors were encountered: https://7me.oji.0j0.jp/2018/07/21/phpenv-build-error-memo/, configure: error: Please reinstall the libzip distribution, apt install libzip-dev How can I control PNP and NPN transistors together from one pin? #include BLAS: /home/kkarius/anaconda3/lib/R/lib/libRblas.so long story short: if "/bin" is in your PATH, cmake doesn't work correctly. Alternatively, you may set the environment variables LIBXML_CFLAGS and LIBXML_LIBS to avoid the need to call pkg-config. How to access WhatsApp through Chrome Web browser? "No package libxml-2.0 installed" - Linux Mint Forums By clicking Sign up for GitHub, you agree to our terms of service and ERROR: configuration failed for package XML * installing *source* package XML Even the AUR version doesn't do anything weird in the PKGBUILD. In file included from /usr/include/libxml2/libxml/parser.h:810:0, @pcercuei correct me if I'm wrong here, but we don't really do anything special with libxml2 in cmake but rely on find_package. Who is listening on a given TCP port on Mac OS X? -- Performing Test WITH_NETWORK_EVENTFD When I try to do an upgrade or install something, apt (-get or aptitude) throw an error, saying that perl can't find XML/SAX/Debian.pm while trying to configure libxml-libxml-perl. [root@catest php-5.5.7]# yum install libxml2-devel What does "up to" mean in "is first up to launch"? error: Don't move past current position; error: Limit number of parser errors; parser: Lower entity nesting limit with XML_PARSE_HUGE; parser: Don't increase depth twice when parsing internal entities; parser: Improve detection of entity loops; parser: Only report a single entity error; libxml.h: Remove dubious definition of LIBXML_STATIC Let me know if you have any further problems. It will still work most of the time, but might not suffice when the newer version of btrfs-tools has added new dependencies (like back in the day when mainline btrfs already supported some newer compression algorithm, but Debian's version . means no "/usr/lib/pkgconfig/libxml-2.0.pc", usually found in the libxml2 development files. 2019/07/20 configure: error: libxml2 not found. Please check your This release finally fixes symbol visibility on UNIX systems. checking for suffix of object files o 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI, Ubuntu 23.04 (Lunar Lobster) is now released and is no longer off-topic, Announcement: AI-generated content is now permanently banned on Ask Ubuntu, Package libprotobuf was not found in the pkg-config search path, OpenSSL installed but no openssl.pc (needed by pkg-config), Can't install RMagick 4.0.0. Can someone explain why this point is giving me 8.3V? libxml not found when installing XML package for R - LinuxQuestions.org so I'm trying to use pkg-config, as it suggests but then getting the new error: /app/INSTALL_FILES/pkg-config-.29.2 # ./configure --with-internal-glib but I get this error when I try 'make' command: # CC=gcc # export CC # make make Looking for job perks? Already on GitHub? Realistically they should be interchangeable packages. /usr/include/libxml2/libxml/encoding.h:31:26: fatal error: unicode/ucnv.h: No such file or directory Can I connect multiple USB 2.0 females to a MEAN WELL 5V 10A power supply? Using an Ohm Meter to test for bonding of a subpanel. add explicit note about dependency on autotools-archive, resolving Gi, https://nick-black.com/bugzilla/show_bug.cgi?id=543. Sign up for a free GitHub account to open an issue and contact its maintainers and the community. The problem in this case is the configure script incorrectly judges you to be using libxml 1 from parsing the include directory. [ 38%] Building C object CMakeFiles/iio.dir/network.c.o does it work when you pass the location of the lib to the script? Not the answer you're looking for? I have checked the pathname for sysroot and it is most certainly correct. Why in the Sierpiski Triangle is this set being used as the example for the OSC and not a more "natural"? * If I'm reading this right, the linker cannot find the lib xml2. All symbol information has been removed from the ELF version script to fix Interpreting non-statistically significant results: Do we have "no evidence" or "insufficient evidence" to reject the null? Command line sequence for building libiio: How a top-ranked engineering school reimagined CS curriculum (Ep. Checking for 1.8: /home/***/anaconda3/include/libxml2/ * edition of libxml Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide. So how can i add libxml-2.0.pc in /usr/lib/pkgconfig/. I run CentOS and have installed the libxml-devel package via yum which is encouraged online. from /usr/include/libxml2/libxml/xmlmemory.h:218, Stack Exchange network consists of 181 Q&A communities including Stack Overflow, the largest, most trusted online community for developers to learn, share their knowledge, and build their careers. microsoft windows - eww ---> libxml2 library not found - Emacs Stack Thanks for pointing this out as I've kind of been stuck on this for a bit trying to do it from CMake within my project. I wasn't see anyway to override this false positive libxml1 check, so a hack of a workaround you can use is to patch out that branch of the configure script. while building fro source, libiio seems to be unable to find libxml2, at least unter arch linux. If you also run: ./configure --help. [ 25%] Building C object CMakeFiles/iio.dir/local.c.o -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) Generating points along line with specifying the origin of point generation in QGIS. You have to ignore the suggestion from pgModeler documentation. Asking for help, clarification, or responding to other answers. Was there any resolution to this problem? It only mentions what their values should be, that is why I was curious how you knew that they should be called "LIBXML_CFLAGS" and "LIBXML_LIBS". To learn more, see our tips on writing great answers. Connect and share knowledge within a single location that is structured and easy to search. Problems install R XML package on CentOS 7, Traffic: 580 users visited in the last hour, https://cran.rstudio.com/src/contrib/XML_3.98-1.9.tar.gz', https://cloud.r-project.org/src/contrib/XML_3.98-1.9.tar.gz, User Agreement and Privacy Ubuntu 14.04 configure: error: "libxml not found" R itself was installed using anaconda. What is scrcpy OTG mode and how does it work? [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C Can the game be left in an invalid state if all state-based actions are replaced? If total energies differ across different software, how do I decide which software to use? Bioconductor version 3.5 (BiocInstaller 1.26.1), ?biocLite for help Learn more about Stack Overflow the company, and our products. -- Performing Test HAS_WPEDANTIC PHP configure error: xml2-config not found. Check libxml2 installation By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. If you have specified LIBXML_INCDIR, make certain to also So I'm not sure if this correct behaviour, since the libxml & libusb are both in the sysroot specified in the cmake line. @steeldriver Thanks - that answers my original question. [ 27%] Building C object CMakeFiles/iio.dir/network.c.o R "DESeq2/XML"configure: error: "libxml not found" Notify me of followup comments via e-mail. Worked fine on my manjaro machine with just the base-devel group installed. i have noticed that libxml-2.0.pc is exist in other directory i.e. What is scrcpy OTG mode and how does it work? "configure: error: Package requirements (blkid) were not met" How about saving the world? Don't subscribeAllReplies to my comments Can't find ImageMagick with pkg-config on Ubuntu 16.04. rev2023.4.21.43403. mkdir build force = TRUE, I have libxml2 version 2.9.9-2 installed with cmake 3.15.4 on my Manjaro system. Yet there seems to be a problem with libxml2. Platform: x86_64-pc-linux-gnu (64-bit) to your account, phpenv -- Performing Test HAS_PIPE2 libxml2-dev Did the drapes in old theatres actually say "ASBESTOS" on them? Problems install R XML package on CentOS 7 - Bioconductor About 90 memory errors in code paths handling malloc failures have been fixed. downloaded 1.5 MB, * installing *source* package XML Connect and share knowledge within a single location that is structured and easy to search. Making statements based on opinion; back them up with references or personal experience. ================================================== [ 13%] Building C object CMakeFiles/iio.dir/buffer.c.o Special thanks to Googles Open Source Security Subsidies program for It is the XML support library, and required for HTML and XML support in Emacs. https://nick-black.com/bugzilla/show_bug.cgi?id=543 we had a bug on this uninformative error. "Signpost" puzzle from Tatham's collection. Have a question about this project? Content Discovery initiative April 13 update: Related questions using a Review our technical responses for the 2023 Developer Survey, Pipe to/from the clipboard in a Bash script. However I do have libxslt installed, e.g. checking for gzopen in -lz yes has been greatly improved. While these issues shouldnt impact security, this improves robustness under -- Detecting C compiler ABI info - done So, any idea where the bug is? By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. During the ./configure it will produce the following error: However I do have libxslt installed, e.g. [ 23%] Building C object CMakeFiles/iio.dir/utilities.c.o For trying out wordpress 3.8 installation, i had to upgrade my php installation from 5.1.6 to 5.2.4 or later version. Minor 9, Patch 4 for 2.9.4 -- Performing Test HAS_O_TMPFILE LAPACK: /home/kkarius/anaconda3/lib/R/lib/libRlapack.so, locale: rev2023.4.21.43403. Configure failure, cannot find xsltproc Issue #1 dankamongmen What are the advantages of running a power tool on 240 V vs 120 V? Why does contour plot not show point(s) where function has a discontinuity? What is this brick with a round back and a stud on the side used for? no checking for xmlParseFile in -lxml. By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. checking for xmlParseFile in -lxml no I think there is a problem with the environment variables when you install R through conda. issues see https://gitlab.gnome.org/GNOME/libxml2/-/issues/507, Powered by Discourse, best viewed with JavaScript enabled, https://download.gnome.org/sources/libxml2/2.11/libxml2-2.11.0.tar.xz, https://gitlab.gnome.org/GNOME/libxml2/-/issues/507. Ah, so you're using Anaconda's R distribution. Thanks for contributing an answer to Ask Ubuntu! What are the advantages of running a power tool on 240 V vs 120 V? : % xsltproc --version Using libxml . With over 10 pre-installed distros to choose from, the worry-free installation life is here! checking for gcc gcc checking how to run the C preprocessor gcc -E Not the answer you're looking for? I updated my R packages the other day, and not surprisingly, one package failed to compile. [ 30%] Building C object CMakeFiles/iio.dir/sort.c.o Package libxml2.0 was not found in the pkg-config search path. sudo apt-get install libxml2-dev I'm unable to determine which is the right version (libxml or libxml2) for 14.04 but you'll want to make sure you have the -dev version installed. With. -- Check for working C compiler: /usr/bin/cc from /usr/include/libxml2/libxml/tree.h:1307, Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. rev2023.4.21.43403. Here are my steps and the results. DESeq2 . The text was updated successfully, but these errors were encountered: The issue here isn't that you're missing xsltproc, but that you're missing the Autotools macro AX_PROG_XSLTPROC which looks for xsltproc. I'm using autoconf 2.69. configure: error: xml2-config not found. Have you tried doing the same command after rebooting your pc ? On whose turn does the fright from a terror dive end? Order relations on natural number objects in topoi, and symmetry. It doesn't mention the names "LIBXML_CFLAGS" and "LIBXML_LIBS" as far as I can see. Home Linux PHP configure error: xml2-config not found. https://download.gnome.org/sources/libxml2/2.11/libxml2-2.11.0.tar.xz (2.50M) -- Looking for libusb_get_version - found Asking for help, clarification, or responding to other answers. You can confirm this on your system by checking rpm -ql libxml2-devel | grep include | head -4 if also see the include files installed in /usr/include/libxml2/libxml. checking for xmlParseFile in -lxml2 yes CMake did not find one. -- Detecting C compile features Can't find libxml in Linux Issue #317 analogdevicesinc/libiio Not the answer you're looking for? /usr/local/Cellar/libxml2/2.9.3/lib/pkgconfig and /usr/local/Library/ENV/pkgconfig/. Sign up for a free GitHub account to open an issue and contact its maintainers and the community. Ask Ubuntu is a question and answer site for Ubuntu users and developers. Now this wont work. libxml >>installed was1.8.3, did not work so I installed libxml2 2.2.2 >>and libxml2-devel 2.2.2. xml2 installed but not found during compilation. Connect and share knowledge within a single location that is structured and easy to search. Looks like the new markdown functionality is affecting the last section`# Install XML` with an `a href` tags, but looks normal when I try to edit the post. checking for sed /bin/sed hi, when i configure dictconvert in dictconvert folder with ./configure command, then i get an error, it as follows: checking for libxml - version >= 2.5.0. no *** The xml2-config script installed by LIBXML could not be found *** If libxml was installed in PREFIX, make sure PREFIX/bin is in *** your path, or set the XML2_CONFIG environment variable to the *** full path to xml2-config. Are there any canonical examples of the Prime Directive being broken that aren't shown on screen? For me, this gives: Answers to some questions suggest adding the path to PKG_CONFIG_PATH. What differentiates living as mere roommates from living in a marriage-like relationship? It only takes a minute to sign up. 565), Improving the copy in the close modal and post notices - 2023 edition, New blog post from our CEO Prashanth: Community is the future of AI. ~. During the ./configure it will produce the following error: ./configure: line 6233: AX_PROG_XSLTPROC: command not found configure: error: Cannot find xsltproc. 2. Xml2 package installation issues - pkg-config PATH help libffi: Unfortunately, however, this appears not to be the case for libxml2 for some reason. Ongoing work on libxml2 relies on funding. https://github.com/analogdevicesinc/libiio/blob/master/README.md. checking whether we are cross compiling no My cmake generated path in iiod/CMakeFiles/iiod.dir/DependInfo.cmake includes /usr/inlucde/libxml2. For a list of important open from /usr/include/libxml2/libxml/globals.h:18, [ 19%] Building C object CMakeFiles/iio.dir/scan.c.o checking whether the C compiler works yes Like "libxml2-devel". Learn more about Stack Overflow the company, and our products. link errors with --no-undefined-version. checking for xml2-config /home/kkarius/anaconda3/bin/xml2-config What positional accuracy (ie, arc seconds) is necessary to view Saturn, Uranus, beyond? Whether you are a digital nomad or just looking for flexibility, Shells can put your Linux machine on the device that you want to use. checking for xmlParseFile in -lxml2 no Yes, the *-dev packages don't exist in Arch Linux, so I can't forget it. I have nearly no idea about cmake, so I probably didn't find out everything, but the file that gets created with the include path seems very wrong: These paths should be /usr/inlucde/libxml2. Will check out your README and see if this fits in my project scope, which I think it should. configure script cannot find libxml2 on mac. Then running pkg-config --variable pc_path pkg-config gives (my highlighting): /usr/local/lib/x86_64-linux-gnu/pkgconfig:/usr/local/lib/pkgconfig:/usr/local/share/pkgconfig:/usr/lib/x86_64-linux-gnu/pkgconfig:/usr/lib/pkgconfig:/usr/share/pkgconfig. In your case, this is likely possible using: export PKG_CONFIG_PATH="$PKG_CONFIG_PATH:/opt/libxml2/lib/pkgconfig" [2020-01-17 10:10 UTC] 823688826 at qq dot com -Status: Feedback +Status: [2020-01-17 10:10 UTC] 823688826 at qq dot com -- Looking for strerror_r Find centralized, trusted content and collaborate around the technologies you use most. no checking for xmlParseFile in -lxml. In file included from /usr/include/libxml2/libxml/parser.h:810:0, Futuristic/dystopian short story about a man living in a hive society trying to meet his dying mother. Your post saved me, thank you! to your account. -- Check size of struct usb_functionfs_descs_head_v2 - done So, why would I get "No package 'libxml2.0' found", and how might I fix this? I agree, this works for me. checking for gcc gcc -- Looking for stddef.h Several cases of quadratic behavior in the XML push parser have been fixed. Are there any canonical examples of the Prime Directive being broken that aren't shown on screen? I also installed R through conda. simplifying this part of the code base and improving error reporting. Working PATH (for me): /usr/local/sbin:/usr/local/bin:/usr/bin:/var/lib/flatpak/exports/bin:/usr/lib/jvm/default/bin:/usr/bin/site_perl:/usr/bin/vendor_perl:/usr/bin/core_perl. Could a subterranean river or aquifer generate enough continuous momentum to power a waterwheel for the purpose of producing electricity? i have tried to install libxml2 with $ brew install libxml but its says Warning: libxml2-2.9.3 already installed. Can you still use Commanders Strike if the only attack available to forego is an attack against an ally? By clicking Post Your Answer, you agree to our terms of service, privacy policy and cookie policy. sha256sum: b1a2fca3f7722d6c35a4f24974a1b5800e4d84ec5cb756bc61ef2b8c75a19e36. It should be /usr/include/libxml2. but setting the config in the R environment doesn't help: UPDATE I already had libxml2 installed in the system see: Make sure your system has the libxml-dev or libxml2-dev package installed. So I'm not sure if this correct behaviour, since the libxml & libusb are both in the sysroot specified in the cmake line. I suspect that libusb is also being found in /usr/lib. [OpenStack Glance]: Failed to contact the endpoint at https://localhost:9292 for discovery. ^ I have tried upgrading to 16.x but the upgrade process fails with errors need to zoom in into that another time. [ 11%] Building C object CMakeFiles/iio.dir/device.c.o sponsoring much of the work on this release! (Related homebrew issue: "libxml2 install path".). -- Looking for strerror_r - found CMakeFiles/Makefile2:67: recipe for target 'CMakeFiles/iio.dir/all' failed https://github.com/analogdevicesinc/libiio.git, https://github.com/analogdevicesinc/libiio/blob/master/README.md. configure: error: "libxml not found" You are missing a system requirement it seems. I've tried to run with & without "/bin" in the PATH and get the same results. Here is the full error message : configuring libxml-libxml-perl (2.0108+dfsg-1ubuntu0.1) . Does a password policy with a restriction of repeated characters increase security? Content Discovery initiative April 13 update: Related questions using a Review our technical responses for the 2023 Developer Survey, Error installing R 2.13.0 packages (caret) on Ubuntu 10.04, Unable to compile xps after installing ROOT, missing libraries, RCDK package installation fails in R studio.
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